STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106573976GTP-binding protein Di-Ras1. (198 aa)    
Predicted Functional Partners:
LOC106586233
Rap guanine nucleotide exchange factor 4-like isoform X1.
   
 0.812
LOC106581759
Rap guanine nucleotide exchange factor 4-like isoform X2.
   
 0.812
LOC106611555
Rap guanine nucleotide exchange factor 2-like isoform X5.
    
 0.727
rapgef2
Rap guanine nucleotide exchange factor 2 isoform X8.
    
 0.727
ENSSSAP00000071238
Rap guanine nucleotide exchange factor (GEF) 6.
    
 0.727
LOC106608776
E3 ubiquitin-protein ligase KEG-like.
    
 0.670
LOC106611341
Intersectin-2-like.
   
 0.660
ENSSSAP00000067020
Intersectin 2b.
   
 0.660
LOC106596021
Serine/threonine-protein kinase B-raf-like.
    
 0.658
LOC106580530
Serine/threonine-protein kinase A-Raf-like isoform X1.
    
 0.658
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.