STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106569366Complement factor B-like; Belongs to the peptidase S1 family. (753 aa)    
Predicted Functional Partners:
LOC106595673
Complement factor H-like.
   
 0.917
C1QC-2
Complement C1q subcomponent subunit C-like.
   
 0.886
c5
Complement C5.
   
 0.877
C1QC
Complement C1q subcomponent subunit C precursor.
   
 
 0.859
cfhr5
LOW QUALITY PROTEIN: complement factor H-related protein 5.
   
 0.841
LOC106560552
Complement factor H-like.
   
 0.841
LOC106602034
Mannose-binding protein C-like.
   
 
 0.792
LOC106601909
Mannose-binding protein C-like.
   
 
 0.792
ENSSSAP00000032713
Mannose-binding protein C-like.
   
 
 0.792
LOC106595495
Complement C3.
   
 0.765
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.