Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106574475ELAV-like protein; Belongs to the RRM elav family. (357 aa)    
Predicted Functional Partners:
dhx9
ATP-dependent RNA helicase A isoform X1.
   
 
 0.929
LOC106580094
Heterogeneous nuclear ribonucleoprotein K-like isoform X1.
   
 
 0.868
LOC106562047
Heterogeneous nuclear ribonucleoprotein K-like isoform X2.
   
 
 0.868
hnrnpk
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 
 0.868
LOC106568347
Heterogeneous nuclear ribonucleoprotein K-like isoform X4.
   
 
 0.868
LOC106569367
Heterogeneous nuclear ribonucleoprotein C-like isoform X1.
   
 0.819
LOC106577997
Heterogeneous nuclear ribonucleoprotein C-like isoform X1.
   
 0.819
LOC106600345
Heterogeneous nuclear ribonucleoprotein C-like isoform X1.
   
 0.819
ENSSSAP00000095420
annotation not available
   
 0.819
ENSSSAP00000028747
annotation not available
    
  0.812
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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