Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000012504Dystrophin-like. (626 aa)    
Predicted Functional Partners:
sspn
Sarcospan.
    
 0.847
LOC106573669
Beta-2-syntrophin-like.
   
 0.827
LOC106560900
Beta-2-syntrophin-like.
   
 0.827
snta1
Alpha-1-syntrophin.
   
 0.827
SNTA1
Alpha-1-syntrophin-like isoform X2.
   
 0.827
LOC106589634
Alpha-sarcoglycan-like isoform X2.
    
 0.826
ENSSSAP00000036020
annotation not available
    
 0.820
LOC106566673
Dystroglycan-like.
    
 0.820
LOC106571846
Dystroglycan-like.
    
 0.820
LOC106565061
Dystroglycan-like.
    
 0.820
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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