STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603627Inactive peptidyl-prolyl cis-trans isomerase FKBP6-like. (251 aa)    
Predicted Functional Partners:
cdk5rap3
CDK5 regulatory subunit associated protein 3-like.
    
   0.823
hs90b
Heat shock protein HSP 90-beta isoform X1.
   
 0.773
hsp90ab1
Heat shock protein HSP 90-beta.
   
 0.773
LOC106608136
Heat shock protein HSP 90-alpha-like.
   
 0.773
hs90a
Heat shock protein HSP 90-alpha 1-like.
   
 0.773
ENSSSAP00000052115
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
   
 0.697
LOC106561550
Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like.
   
 0.697
tsc1
Hamartin isoform X2.
   
 0.694
trap1
Heat shock protein 75 kDa, mitochondrial.
   
 0.694
LOC106565454
Hamartin-like.
   
 0.694
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.