STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cssa20h12orf43CL043 protein. (278 aa)    
Predicted Functional Partners:
crcp
DNA-directed RNA polymerase III subunit RPC9.
   
    0.680
krit1
Krev interaction trapped protein 1 isoform X1.
   
    0.605
krit1-2
Krev interaction trapped protein 1.
   
    0.605
cinp
Cyclin-dependent kinase 2-interacting protein.
   
    0.577
ENSSSAP00000077142
annotation not available
   
    0.577
LOC106609030
Glycoprotein hormones alpha chain; Belongs to the glycoprotein hormones subunit alpha family.
      
 0.511
ENSSSAP00000092885
Uncharacterized LOC106578061.
      
 0.511
LOC106563469
Putative FERM domain-containing protein FRMD8P1.
   
    0.477
frmd8
FERM domain-containing protein 8 isoform X1.
   
    0.477
ENSSSAP00000108505
annotation not available
      
 0.446
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.