Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106580180Transmembrane emp24 domain-containing protein 7-like. (218 aa)    
Predicted Functional Partners:
ENSSSAP00000084846
annotation not available
    
 0.977
LOC106592035
TNF receptor-associated factor 6-like.
    
 0.952
LOC106562692
TNF receptor-associated factor 6-like.
    
 0.952
LOC106599735
Receptor-interacting serine/threonine-protein kinase 1-like isoform X1.
   
 0.927
ripk1
Receptor-interacting serine/threonine-protein kinase 1.
   
 0.927
tmed2
Transmembrane emp24 domain-containing protein 2 isoform X1.
   
 0.914
tmed2-2
Transmembrane emp24 domain-containing protein 2 isoform X1.
   
 0.914
LOC106562632
Transmembrane emp24 domain-containing protein 2-like isoform X1.
   
 0.914
LOC106591465
Transmembrane emp24 domain-containing protein 10-like.
   
 0.888
TMEDA
Transmembrane emp24 domain-containing protein 10 precursor.
   
 0.888
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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