STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106580180Transmembrane emp24 domain-containing protein 7-like. (218 aa)    
Predicted Functional Partners:
ENSSSAP00000084846
annotation not available
   
 0.970
tmed2
Transmembrane emp24 domain-containing protein 2 isoform X1.
   
0.931
tmed2-2
Transmembrane emp24 domain-containing protein 2 isoform X1.
   
0.931
LOC106562632
Transmembrane emp24 domain-containing protein 2-like isoform X1.
   
0.931
irf-3
Interferon regulatory factor 3 isoform X1.
    
 0.918
hibch
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 
 0.910
mrpl46
39S ribosomal protein L46, mitochondrial.
   
 
 0.897
mrps11
28S ribosomal protein S11, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.894
mrpl22
39S ribosomal protein L22, mitochondrial isoform X1; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.881
mrpl16
39S ribosomal protein L16, mitochondrial isoform X2; Belongs to the universal ribosomal protein uL16 family.
   
   0.878
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (28%) [HD]