Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605891Small conductance calcium-activated potassium channel protein 2-like. (744 aa)    
Predicted Functional Partners:
LOC106578046
Intermediate conductance calcium-activated potassium channel protein 4-like isoform X1.
     
 0.865
KCNMB4
Calcium-activated potassium channel subunit beta-4.
     
 0.856
LOC106599181
Calcium-activated potassium channel subunit beta-2-like.
     
 0.738
LOC106568748
Calcium-activated potassium channel subunit beta-2-like isoform X1.
     
 0.738
LOC106567505
Gamma-aminobutyric acid receptor subunit alpha-1-like isoform X1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.728
LOC100380670
Gamma-aminobutyric acid receptor subunit alpha-1 isoform X1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.728
LOC106577193
Calcium-activated potassium channel subunit alpha-1-like isoform X19.
   
 
 0.663
LOC106613356
Calcium-activated potassium channel subunit alpha-1-like isoform X17.
   
 
 0.663
LOC106611671
Calcium-activated potassium channel subunit alpha-1-like isoform X7.
   
 
 0.663
LOC106589905
Calcium-activated potassium channel subunit alpha-1 isoform X5.
   
 
 0.663
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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