STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xpnpep1xaa-Pro aminopeptidase 1 isoform X1; Belongs to the peptidase M24B family. (651 aa)    
Predicted Functional Partners:
LOC106613062
Uncharacterized protein LOC106613062.
    
  0.754
ENSSSAP00000105030
Dimethylglycine dehydrogenase.
  
 0.584
dmgdh
Dimethylglycine dehydrogenase, mitochondrial.
  
 0.584
sardh
Sarcosine dehydrogenase, mitochondrial.
  
 0.581
pdpr
Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial.
  
 0.581
LOC106566775
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.571
ENSSSAP00000079748
Aminomethyltransferase.
  
 0.571
ENSSSAP00000000700
annotation not available
  
  
 0.531
LOC106590181
Gamma-adducin-like isoform X2.
  
  
 0.531
LOC106607168
Probable Xaa-Pro aminopeptidase 3 isoform X1.
      
 0.511
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.