STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
unc119bProtein unc-119 homolog B. (244 aa)    
Predicted Functional Partners:
nphp3
Nephrocystin-3 isoform X1.
    
 0.859
RP2
RP2 activator of ARL3 GTPase.
     
 0.806
LOC106574114
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
     
 0.806
arl2
ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.787
LOC106563294
ADP-ribosylation factor-like protein 3 isoform X1; Belongs to the small GTPase superfamily. Arf family.
    
 0.724
LOC106589841
ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.
    
 0.724
ENSSSAP00000080673
ADP ribosylation factor like GTPase 3b.
    
 0.724
LOC106560579
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
  
   
 0.588
pde6d
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X1.
  
   
 0.579
LOC106578912
Tubulin-specific chaperone C-like.
     
 0.578
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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