STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kiaa2013Uncharacterized protein KIAA2013 homolog. (627 aa)    
Predicted Functional Partners:
vps13d
Vacuolar protein sorting-associated protein 13D isoform X2.
      
 0.601
miip
Migration and invasion-inhibitory protein.
      
 0.594
hectd3
E3 ubiquitin-protein ligase HECTD3 isoform X1.
      
 0.581
LOC106566310
V-type proton ATPase subunit S1-like.
    
   0.553
LOC106567107
V-type proton ATPase subunit S1-like.
    
   0.553
ENSSSAP00000050583
annotation not available
    
   0.553
mblac2
Metallo-beta-lactamase domain-containing protein 2.
      
 0.511
LOC106585808
Metallo-beta-lactamase domain-containing protein 2-like.
      
 0.511
LOC106566872
Protein polyglycylase TTLL10-like isoform X2.
      
 0.511
ENSSSAP00000027429
annotation not available
    
   0.489
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.