STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000012632annotation not available (116 aa)    
Predicted Functional Partners:
LOC106577941
FACT complex subunit SPT16-like isoform X1.
   
 0.896
LOC106608973
FACT complex subunit SPT16.
   
 0.896
SUPT6H
SPT6 homolog, histone chaperone and transcription elongation factor.
   
 0.883
LOC106602907
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
   
 0.883
LOC106594708
Transcription elongation factor SPT6-like.
   
 0.883
LOC106563783
Transcription elongation factor SPT6-like.
   
 0.883
SUPT6H-2
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
   
 0.883
srbd1
S1 RNA-binding domain-containing protein 1 isoform X1.
   
 0.851
LOC106588677
Endonuclease/exonuclease/phosphatase family domain-containing protein 1-like.
   
 0.851
EEPD1
Endonuclease/exonuclease/phosphatase family domain-containing protein 1-like.
   
 0.851
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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