STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fgf12Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (252 aa)    
Predicted Functional Partners:
ngl1
netrin-G1 ligand isoform X1.
   
 
 0.654
LOC106593359
Leucine-rich repeat-containing protein 4C-like.
   
 
 0.652
LOC106573348
Leucine-rich repeat-containing protein 4C-like.
   
 
 0.652
LOC106568015
Fibroblast growth factor receptor 4-like.
    
 0.613
LOC106603480
Fibroblast growth factor receptor 4-like.
    
 0.613
lrrc4c
Leucine-rich repeat-containing protein 4C.
   
 
 0.582
fgfr2
Fibroblast growth factor receptor 2.
    
 0.573
LOC106573128
Fibroblast growth factor receptor substrate 2-like.
     
 0.570
LOC106597280
Fibroblast growth factor receptor substrate 2-like.
     
 0.570
LOC106561545
Fibroblast growth factor receptor substrate 2-like.
     
 0.570
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.