STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106585723Nucleolar protein 11-like. (720 aa)    
Predicted Functional Partners:
utp15
U3 small nucleolar RNA-associated protein 15 homolog.
   
 0.988
LOC106610597
WD repeat-containing protein 43-like.
   
 0.985
LOC106561875
WD repeat-containing protein 43-like.
   
 0.985
utp4
Cirhin.
   
 0.980
LOC106573694
Cirhin-like isoform X1.
    
 0.980
wdr75
WD repeat-containing protein 75 isoform X2.
   
 0.977
LOC106586141
WD repeat-containing protein 75-like isoform X2.
   
 0.977
utp20
Small subunit processome component 20 homolog.
   
 0.962
heatr1
HEAT repeat-containing protein 1.
   
 0.958
ENSSSAP00000052865
annotation not available
   
 0.958
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.