Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106573414Kelch repeat and BTB domain-containing protein 13-like isoform X1. (569 aa)    
Predicted Functional Partners:
LOC106599567
UBX domain-containing protein 7-like isoform X1.
    
  0.565
LOC106568865
UBX domain-containing protein 7-like.
    
  0.565
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.553
bbs9
Protein PTHB1 isoform X1.
    
 0.490
ENSSSAP00000061924
annotation not available
    
 0.490
ENSSSAP00000061927
annotation not available
    
 0.490
LOC106611037
Tetratricopeptide repeat protein 8-like isoform X1.
    
  0.478
LOC106591546
Tetratricopeptide repeat protein 8-like isoform X1.
    
  0.478
LOC106578239
TSC22 domain family protein 4-like.
  
 
   0.421
LOC106580066
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.418
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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