STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609696Death-associated protein kinase 3-like. (588 aa)    
Predicted Functional Partners:
becn1
Beclin-1 isoform X1.
   
 0.924
calm2
Calmodulin.
   
 0.609
calm1
Calmodulin.
   
 0.609
calm2-2
Calmodulin.
   
 0.609
LOC106607304
Uncharacterized protein LOC106607304 isoform X2.
   
 0.609
calm2-4
Calmodulin 2 (Phosphorylase kinase, delta)-1; Belongs to the calmodulin family.
   
 0.609
calm2-5
Calmodulin.
   
 0.609
LOC106579364
EF-hand calcium-binding domain-containing protein 3-like.
   
 0.609
calm2-6
Calmodulin.
   
 0.609
calm2-7
Salmo salar calmodulin 2 (phosphorylase kinase, delta)-3 (LOC100194629), mRNA.
   
 0.609
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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