STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106579790Presenilins-associated rhomboid-like protein, mitochondrial. (354 aa)    
Predicted Functional Partners:
stml2
Stomatin-like protein 2.
   
 0.743
STOML2
Stomatin-like protein 2, mitochondrial.
   
 0.743
YME1L1
ATP-dependent zinc metalloprotease YME1L1-like isoform X1.
   
 
 0.679
LOC106568699
ATP-dependent zinc metalloprotease YME1L1-like isoform X1.
   
 
 0.679
LOC106598156
ATP-dependent zinc metalloprotease YME1L1-like isoform X1.
   
 
 0.679
LOC106590300
ATP-dependent zinc metalloprotease YME1L1-like isoform X1.
   
 
 0.679
pink1
Serine/threonine-protein kinase PINK1, mitochondrial.
    
 
 0.660
PHB2
Prohibitin.
   
 0.625
LOC106568660
Prohibitin-2-like isoform X1.
   
 0.625
PHB2-2
Prohibitin.
   
 0.625
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.