STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106564385Integral membrane protein DGCR2/IDD-like isoform X1. (542 aa)    
Predicted Functional Partners:
LOC106611341
Intersectin-2-like.
    
 0.693
ENSSSAP00000067020
Intersectin 2b.
    
 0.693
kansl2
KAT8 regulatory NSL complex subunit 2.
      
 0.595
LOC106590901
Protein phosphatase 1F-like.
      
 0.595
ascc2
Activating signal cointegrator 1 complex subunit 2 isoform X1.
      
 0.594
LOC106585905
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
      
 0.593
LOC106580467
Ran-specific GTPase-activating protein-like.
      
 0.561
RELN
Reelin-like.
    
 0.553
ENSSSAP00000049421
Reelin-like.
    
 0.553
LOC106561737
Reelin-like.
    
 0.553
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.