STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106579935Aspartate beta-hydroxylase domain-containing protein 2-like. (360 aa)    
Predicted Functional Partners:
srrd
SRR1-like protein isoform X1.
      
 0.688
ccdc166
Coiled-coil domain-containing protein 166.
      
 0.671
hps4
Hermansky-Pudlak syndrome 4 protein.
      
 0.647
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
      
 0.591
LOC106600645
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1-like isoform X1.
      
 0.582
kif22
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.568
pagr1
PAXIP1-associated glutamate-rich protein 1 isoform X2.
      
 0.567
ogfod2
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform X1.
      
 0.562
LOC106613914
acyl-CoA-binding domain-containing protein 6 isoform X2.
      
 0.560
LOC106584314
acyl-CoA-binding domain-containing protein 6-like isoform X1.
      
 0.560
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.