STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cldn1Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (212 aa)    
Predicted Functional Partners:
gdap1
Ganglioside-induced differentiation-associated protein 1 isoform X1; Belongs to the GST superfamily.
    
 0.814
pex14
Peroxisomal membrane protein PEX14.
     
 0.762
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.759
LOC106569376
Peroxisomal biogenesis factor 19-like.
    
 0.734
ENSSSAP00000072258
annotation not available
    
 0.734
ENSSSAP00000086973
Peroxisomal biogenesis factor 3.
     
 0.712
pex3
Peroxisomal biogenesis factor 3.
     
 0.712
pex13
Peroxisomal membrane protein PEX13 isoform X1.
     
 0.695
PEX13
Peroxisomal biogenesis factor 13.
     
 0.695
pex11b
Peroxisomal membrane protein 11B isoform X1.
    
 0.676
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.