STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106574336A disintegrin and metalloproteinase with thrombospondin motifs 1-like. (945 aa)    
Predicted Functional Partners:
LOC106605320
Brevican core protein-like isoform X1.
     
 0.533
LOC106580754
Aggrecan core protein-like isoform X2.
     
 0.533
LOC106612440
Beta-1,3-glucosyltransferase-like isoform X3.
    
 0.482
B3GLT
Beta-1,3-glucosyltransferase precursor.
    
 0.482
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
   
  
 0.463
LOC106586440
GDP-fucose protein O-fucosyltransferase 2-like isoform X1.
     
 0.458
LOC106582296
GDP-fucose protein O-fucosyltransferase 2-like.
     
 0.458
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.