STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106563454Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (629 aa)    
Predicted Functional Partners:
trrap
Transformation/transcription domain-associated protein isoform X8; Belongs to the PI3/PI4-kinase family.
   
 0.950
MSL3
Male-specific lethal 3 homolog isoform X1.
    
 0.915
meaf6
Chromatin modification-related protein MEAF6 isoform X1.
    
 0.910
LOC106589015
Chromatin modification-related protein MEAF6 isoform X3.
    
 0.910
dmap1
DNA methyltransferase 1-associated protein 1 isoform X2.
   
 0.902
ruvb1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.895
LOC106583210
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.895
msl2
Male-specific lethal 2-like 1.
   
 0.873
LOC106590518
E3 ubiquitin-protein ligase MSL2-like.
   
 0.873
MO4L1
Mortality factor 4-like protein 1.
   
 0.867
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.