STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106581314phenylalanine--tRNA ligase beta subunit-like isoform X1. (591 aa)    
Predicted Functional Partners:
syfa
Phenylalanyl-tRNA synthetase alpha chain.
  
 0.999
LOC106601350
phenylalanine--tRNA ligase alpha subunit.
  
 0.998
ENSSSAP00000028634
annotation not available
  
 0.981
LOC106565968
phenylalanine--tRNA ligase, mitochondrial-like.
  
 0.981
ENSSSAP00000071129
phenylalanyl-tRNA synthetase 2, mitochondrial.
  
 0.981
EPRS1
Bifunctional glutamate/proline--tRNA ligase-like.
  
 
 0.960
LOC106561878
Bifunctional glutamate/proline--tRNA ligase-like isoform X1.
  
 
 0.960
LOC106583784
isoleucine--tRNA ligase, cytoplasmic-like; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.939
ENSSSAP00000045857
isoleucyl-tRNA synthetase 1.
  
 
 0.939
LOC106563953
Ferredoxin-fold anticodon-binding domain-containing protein 1 homolog.
  
 0.938
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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