Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106578369RPE-retinal G protein-coupled receptor-like. (295 aa)    
Predicted Functional Partners:
gng10
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
 0.901
LOC106591794
Visual pigment-like receptor peropsin.
  
 
 0.764
RHO
Rhodopsin.
   
 
 0.756
ENSSSAP00000110237
Rhodopsin, like.
   
 
 0.756
LOC100136370
Rhodopsin.
   
 
 0.756
GNAT2
Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1.
    
 0.749
LOC106566369
Guanine nucleotide-binding protein G(T) subunit alpha-2-like.
    
 0.749
LOC106565989
Guanine nucleotide-binding protein G(T) subunit alpha-1.
    
 0.749
GNAT2-2
Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1.
    
 0.749
ENSSSAP00000106289
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
    
 0.749
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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