STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106560995Protein phosphatase 1H-like isoform X1. (526 aa)    
Predicted Functional Partners:
osgin2
Oxidative stress-induced growth inhibitor 2.
      
 0.507
tdp2
tyrosyl-DNA phosphodiesterase 2 isoform X1.
      
 0.502
dclre1a
DNA cross-link repair 1A protein.
      
 0.494
LOC106580462
tyrosyl-DNA phosphodiesterase 2-like isoform X2.
      
 0.470
LOC106611172
Breast cancer metastasis-suppressor 1-like protein-A.
      
 0.435
LOC106608221
Breast cancer metastasis-suppressor 1-like protein-A isoform X3.
      
 0.435
LOC106571671
Breast cancer metastasis-suppressor 1-like protein-A isoform X1.
      
 0.435
LOC106588438
Polyhomeotic-like protein 1 isoform X3.
      
 0.428
LOC106569996
Polyhomeotic-like protein 1 isoform X1.
      
 0.428
LOC106568497
Probable E3 ubiquitin-protein ligase HERC1.
      
 0.416
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.