STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
setd1bHistone-lysine N-methyltransferase SETD1B isoform X2. (1850 aa)    
Predicted Functional Partners:
LOC106562981
set1/Ash2 histone methyltransferase complex subunit ASH2-like.
    
 0.960
LOC100194676
set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X2.
    
 0.960
LOC106583489
Retinoblastoma-binding protein 5-like isoform X1.
    
 0.960
LOC106565113
Retinoblastoma-binding protein 5 isoform X1.
    
 0.960
LOC106562992
polyubiquitin-B.
   
 0.869
LOC106565976
WD repeat-containing protein 82.
   
 0.858
LOC106582800
WD repeat-containing protein 82-like isoform X1.
   
 0.858
DPY30
Protein dpy-30 homolog isoform X2.
    
 0.853
LOC106586224
Protein dpy-30 homolog isoform X1.
    
 0.853
LOC106564822
Protein dpy-30 homolog isoform X2.
    
 0.853
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.