STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106575045Nuclear fragile X mental retardation-interacting protein 1-like isoform X1. (601 aa)    
Predicted Functional Partners:
znhit6
Box C/D snoRNA protein 1.
   
 
 0.643
znhit3
Zinc finger HIT domain-containing protein 3.
    
 
 0.626
pih1d1
PIH1 domain-containing protein 1.
    
 
 0.616
LOC106609438
RNA polymerase II-associated protein 3-like isoform X2.
   
 0.532
rpap3
RNA polymerase II-associated protein 3 isoform X1.
   
 0.532
znhit2
Zinc finger HIT domain-containing protein 2.
    
 
 0.510
tti1
TELO2-interacting protein 1 homolog.
      
 0.473
ruvbl2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.465
rrp12
RRP12-like protein isoform X2.
      
 0.452
nxf1
Nuclear RNA export factor 1.
    
 
 0.445
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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