Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC106611541Collagen alpha-1(XXI) chain-like. (777 aa)    
Predicted Functional Partners:
ak7
Adenylate kinase 7.
    
 
 0.659
LOC106607177
Neuroendocrine convertase 2-like isoform X1; Belongs to the peptidase S8 family.
     
 0.656
pcsk2
Neuroendocrine convertase 2; Belongs to the peptidase S8 family.
     
 0.656
ENSSSAP00000049539
Protein O-fucosyltransferase 1.
      
 0.645
pofut1
GDP-fucose protein O-fucosyltransferase 1.
      
 0.645
AKAP7
A-kinase anchor protein 7 isoform gamma-like isoform X1.
      
 0.645
LOC106571361
A-kinase anchor protein 7 isoform gamma-like.
      
 0.645
ABHD1
Abhydrolase domain-containing protein 1-like isoform X1.
      
 0.644
LOC106566571
Beta-1,4-galactosyltransferase 5-like.
      
 0.644
LOC106600540
Uncharacterized protein LOC106600540.
    
 0.566
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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