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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106611541Collagen alpha-1(XXI) chain-like. (777 aa)    
Predicted Functional Partners:
LOC106607177
Neuroendocrine convertase 2-like isoform X1; Belongs to the peptidase S8 family.
    
 0.630
pcsk2
Neuroendocrine convertase 2; Belongs to the peptidase S8 family.
    
 0.630
LOC106566571
Beta-1,4-galactosyltransferase 5-like.
     
 0.623
ENSSSAP00000049539
Protein O-fucosyltransferase 1.
      
 0.620
pofut1
GDP-fucose protein O-fucosyltransferase 1.
      
 0.620
AKAP7
A-kinase anchor protein 7 isoform gamma-like isoform X1.
      
 0.613
LOC106571361
A-kinase anchor protein 7 isoform gamma-like.
      
 0.613
ABHD1
Abhydrolase domain-containing protein 1-like isoform X1.
      
 0.610
ak7
Adenylate kinase 7.
      
 0.605
zbtb24
Zinc finger and BTB domain-containing protein 24.
    
 0.573
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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