STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhofRho-related GTP-binding protein RhoF isoform X1. (210 aa)    
Predicted Functional Partners:
LOC106611341
Intersectin-2-like.
    
 0.889
ENSSSAP00000067020
Intersectin 2b.
    
 0.889
ENSSSAP00000024395
annotation not available
    
 0.841
ENSSSAP00000028539
annotation not available
    
 0.841
ENSSSAP00000086728
annotation not available
    
 0.841
ENSSSAP00000092802
annotation not available
    
 0.841
ENSSSAP00000103215
annotation not available
    
 0.841
rhg15
Rho GTPase-activating protein 15 isoform X1.
    
 0.840
LOC106586330
Rho GTPase-activating protein 15-like.
    
 0.840
cdc42se2
CDC42 small effector protein 2.
    
 0.839
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.