Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SGPP2LOW QUALITY PROTEIN: sphingosine-1-phosphate phosphatase 2. (305 aa)    
Predicted Functional Partners:
LOC106604578
Sphingosine-1-phosphate lyase 1-like isoform X1.
    
 0.967
LOC106576820
Sphingosine-1-phosphate lyase 1-like.
    
 0.967
LOC106613711
Ceramide synthase 2-like.
    
 0.964
LOC106608622
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
     
 0.954
asah2
Neutral ceramidase.
     
 0.954
ENSSSAP00000108065
Alkaline ceramidase 3.
     
 0.950
smpd2
Sphingomyelin phosphodiesterase 2.
     
 0.945
LOC106566664
Ceramide synthase 5-like.
    
 0.942
LOC106568942
Ceramide synthase 2-like.
    
 0.939
smpd1
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.
     
 0.936
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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