Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PepT1Solute carrier family 15 member 1. (166 aa)    
Predicted Functional Partners:
LOC106581993
Uncharacterized protein CXorf21 homolog.
    
 0.806
LOC106586714
Uncharacterized protein LOC106586714.
    
 0.806
LOC106608636
Amino acid transporter.
   
 
 0.693
LOC106577598
Amino acid transporter.
   
 
 0.693
FABPI
Fatty acid-binding protein, intestinal-like; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
  
 0.687
ddx52
Probable ATP-dependent RNA helicase DDX52 isoform X1.
      
 0.686
LOC106563524
Zinc transporter ZIP13-like isoform X1.
    
 
 0.681
ENSSSAP00000023695
Si:dkey-238d18.3.
   
  
 0.655
ENSSSAP00000118422
Meprin A, beta.
   
  
 0.651
pola1
DNA polymerase.
      
 0.644
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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