STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106568845long-chain-fatty-acid--CoA ligase 3-like. (715 aa)    
Predicted Functional Partners:
ppt2a
Lysosomal thioesterase PPT2-A precursor.
   
 
 0.788
LOC106588210
Lysosomal thioesterase PPT2-A-like.
   
 
 0.788
LOC106570067
Lysosomal thioesterase PPT2-A-like.
   
 
 0.783
LOC106585385
long-chain-fatty-acid--CoA ligase ACSBG2-like.
  
0.760
LOC106580039
long-chain-fatty-acid--CoA ligase ACSBG2-like isoform X2.
  
0.760
LOC106584374
long-chain-fatty-acid--CoA ligase ACSBG2-like isoform X1.
  
0.759
LOC106613839
long-chain-fatty-acid--CoA ligase ACSBG2-like isoform X3.
  
0.759
LOC106610003
long-chain-fatty-acid--CoA ligase 1-like isoform X1.
  
0.758
acsl5
long-chain-fatty-acid--CoA ligase 5.
  
0.756
LOC106603829
long-chain-fatty-acid--CoA ligase 6-like isoform X1.
  
0.755
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.