STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXNL4BThioredoxin like 4B. (136 aa)    
Predicted Functional Partners:
zmat2
Zinc finger matrin-type protein 2.
    
 0.980
PRPF6
pre-mRNA processing factor 6.
    
 0.976
prpf6
pre-mRNA-processing factor 6.
    
 0.976
LOC106600990
116 kDa U5 small nuclear ribonucleoprotein component.
    
 0.976
LOC106579886
U5 small nuclear ribonucleoprotein 200 kDa helicase-like.
    
 0.976
LOC106607257
116 kDa U5 small nuclear ribonucleoprotein component.
    
 0.976
LOC106585548
U5 small nuclear ribonucleoprotein 200 kDa helicase.
    
 0.976
LOC100380699
pre-mRNA-processing-splicing factor 8.
    
 0.973
LOC106612861
pre-mRNA-processing-splicing factor 8-like.
    
 0.973
LOC106585463
Small nuclear ribonucleoprotein Sm D3.
   
  0.971
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.