Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tina1Troponin C-akin-1 protein isoform X1. (178 aa)    
Predicted Functional Partners:
bckdha
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
     
  0.752
LOC106575298
Grancalcin-like.
   
  
 0.640
gran
Grancalcin.
   
  
 0.640
TXNRD3
Thioredoxin reductase 1, cytoplasmic-like.
    
 0.634
ENSSSAP00000035639
annotation not available
    
 0.634
LOC106584548
Dihydrolipoyl dehydrogenase, mitochondrial-like.
    
 0.634
ENSSSAP00000085676
Thioredoxin reductase 3.
    
 0.634
LOC106609375
Thioredoxin reductase 1, cytoplasmic-like isoform X1.
    
 0.634
ENSSSAP00000094560
annotation not available
    
 0.634
LOC106561021
Dihydrolipoyl dehydrogenase.
    
 0.634
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (22%) [HD]