Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LOC106573802Forkhead box protein I2-A-like. (406 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase, mitochondrial isoform X2.
     
  0.718
LOC106566901
Transcription factor E2F1-like.
   
  
 0.589
LOC106572360
Transcription factor E2F1-like isoform X2.
   
  
 0.589
LOC106579240
R-spondin-3-like.
     
 0.585
RSPO3
R-spondin-3-like isoform X2.
     
 0.585
LOC106603535
Uromodulin-like 1.
    
 0.580
LOC106609449
Phenylalanine-4-hydroxylase-like.
      
 0.576
LOC106571543
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
      
 0.576
LOC106579352
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
 0.571
hdac1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.545
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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