STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607053HMG box-containing protein 4-like. (620 aa)    
Predicted Functional Partners:
LOC106611731
Proto-oncogene DBL-like isoform X1.
      
 0.742
LOC106604741
Proto-oncogene DBL-like isoform X2.
      
 0.742
LOC106587007
PR domain zinc finger protein 12; Involved in the positive regulation of histone H3-K9 dimethylation; Belongs to the class V-like SAM-binding methyltransferase superfamily.
      
 0.635
myl7
Myosin regulatory light chain 2, atrial isoform.
      
 0.631
MYL7
Myosin regulatory light chain 2, atrial isoform-like.
      
 0.631
ENSSSAP00000078389
Synaptopodin 2-like b.
      
 0.624
LOC106589413
Synaptopodin 2-like protein isoform X1.
      
 0.624
ENSSSAP00000041945
RAB36, member RAS oncogene family.
      
 0.622
LOC106612584
E3 ubiquitin-protein ligase TRIP12-like isoform X1.
    
 
 0.564
LOC106580884
E3 ubiquitin-protein ligase TRIP12 isoform X1.
    
 
 0.564
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.