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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106575904-2Charged multivesicular body protein 2b-like. (193 aa)    
Predicted Functional Partners:
LOC106603331
Charged multivesicular body protein 1B.
   
 0.954
LOC106573671
Charged multivesicular body protein 1a.
   
 0.954
chmp1a
Charged multivesicular body protein 1a.
   
 0.954
CHMP3
Charged multivesicular body protein 3.
   
0.874
chmp3
Charged multivesicular body protein 3.
   
0.874
LOC106579304
Charged multivesicular body protein 2a-like.
   
0.857
LOC106589279
Charged multivesicular body protein 2A.
   
0.857
ENSSSAP00000020131
annotation not available
   
 0.794
LOC106613857
Vacuolar protein sorting-associated protein 4B-like; Belongs to the AAA ATPase family.
   
 0.794
LOC106560901
Vacuolar protein sorting-associated protein 4A isoform X5; Belongs to the AAA ATPase family.
   
 0.794
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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