Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106575904-2Charged multivesicular body protein 2b-like. (193 aa)    
Predicted Functional Partners:
LOC106603331
Charged multivesicular body protein 1B.
   
 0.957
LOC106573671
Charged multivesicular body protein 1a.
   
 0.957
chm1b
Charged multivesicular body protein 1b isoform X1.
   
 0.957
chmp1a
Charged multivesicular body protein 1a.
   
 0.957
LOC106579304
Charged multivesicular body protein 2a-like.
   
 0.952
LOC106589279
Charged multivesicular body protein 2A.
   
 0.952
CHMP3
Charged multivesicular body protein 3.
   
 0.948
chmp3
Charged multivesicular body protein 3.
   
 0.948
LOC100196237
IST1 homolog.
   
 0.936
LOC106562157
IST1 homolog isoform X1.
   
 0.936
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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