Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106610756Rab3 GTPase-activating protein non-catalytic subunit-like isoform X1. (1364 aa)    
Predicted Functional Partners:
LOC106586310
Rab3 GTPase-activating protein catalytic subunit-like isoform X1.
   
 0.988
ENSSSAP00000056094
annotation not available
   
 0.988
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
   
 0.988
LOC106590026
Ras-related protein Rab-18-like.
     
 0.828
rab18
Ras-related protein Rab-18.
     
 0.828
LOC106578546
Ras-related protein Rab-18.
     
 0.828
LOC106602942
Rab proteins geranylgeranyltransferase component A 2-like isoform X1.
   
 
 0.791
tmco4
Transmembrane and coiled-coil domain-containing protein 4 isoform X1.
      
 0.727
nup205
Nuclear pore complex protein Nup205.
   
  
 0.714
ENSSSAP00000009081
annotation not available
   
  
 0.712
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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