STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000012966annotation not available (53 aa)    
Predicted Functional Partners:
COG8
Conserved oligomeric Golgi complex subunit 8-like.
   
 0.842
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.810
LOC106560579
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
     
 0.786
pde6d
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X1.
     
 0.786
LOC106580015
72 kDa inositol polyphosphate 5-phosphatase-like.
     
 0.750
LOC106585421
72 kDa inositol polyphosphate 5-phosphatase-like.
     
 0.750
ift88
Intraflagellar transport protein 88 homolog isoform X5.
    
 0.731
ENSSSAP00000069706
Intraflagellar transport 88 homolog.
    
 0.731
ift74
Intraflagellar transport protein 74 homolog isoform X1.
    
 0.712
ift46
Intraflagellar transport protein 46 homolog isoform X1.
    
 
 0.704
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.