Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000012966annotation not available (53 aa)    
Predicted Functional Partners:
ift74
Intraflagellar transport protein 74 homolog isoform X1.
    
 
 0.910
ift52
Intraflagellar transport protein 52 homolog.
    
 
 0.907
ift46
Intraflagellar transport protein 46 homolog isoform X1.
    
 
 0.890
ENSSSAP00000031882
annotation not available
    
 
 0.888
ift22
Rab-like protein 5.
    
 
 0.888
COG8
Conserved oligomeric Golgi complex subunit 8-like.
   
 0.877
LOC106585468
Intraflagellar transport protein 81 homolog.
    
 
 0.877
ENSSSAP00000109669
annotation not available
    
 
 0.877
LOC106560579
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
     
 0.838
pde6d
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X1.
     
 0.838
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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