STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
il8Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. (97 aa)    
Predicted Functional Partners:
LOC106608883
Growth-regulated alpha protein-like.
    
 0.789
tsg6
Tumor necrosis factor-inducible protein TSG-6 precursor.
   
 
 0.769
LOC106582339
Tumor necrosis factor-inducible gene 6 protein-like isoform X1.
   
 
 0.769
cxl14
C-X-C motif chemokine 14 precursor.
    
 
 0.557
LOC106604935
C-X-C motif chemokine 14-like isoform X1.
    
 
 0.557
LOC106597653
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.515
ENSSSAP00000026267
annotation not available
   
 0.515
ENSSSAP00000053215
annotation not available
   
 0.515
LOC106577833
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.515
LOC106580715
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.515
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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