ENSSSAP00000012988 protein (Salmo salar) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSSSAP00000012988

annotation not available (136 aa)

Predicted Functional Partners:

LOC106562421

0.615

gnl3l

0.552

LOC106581333

0.541

LOC106566567

0.538

LOC106601978

0.530

ENSSSAP00000053156

0.530

ENSSSAP00000023171

0.481

LOC106603642

0.456

LOC106567730

0.456

LOC106581151

0.453

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000012988	ENSSSAP00000023171	ENSSSAP00000012988	ENSSSAP00000023171	annotation not available	annotation not available	0.481
ENSSSAP00000012988	ENSSSAP00000053156	ENSSSAP00000012988	ENSSSAP00000053156	annotation not available	Solute carrier family 6 member 7.	0.530
ENSSSAP00000012988	LOC106562421	ENSSSAP00000012988	ENSSSAP00000050061	annotation not available	Sodium-dependent noradrenaline transporter-like.	0.615
ENSSSAP00000012988	LOC106566567	ENSSSAP00000012988	ENSSSAP00000107915	annotation not available	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.538
ENSSSAP00000012988	LOC106567730	ENSSSAP00000012988	ENSSSAP00000070614	annotation not available	Cell adhesion molecule 1-like isoform X3.	0.456
ENSSSAP00000012988	LOC106581151	ENSSSAP00000012988	ENSSSAP00000079245	annotation not available	Cell adhesion molecule 1-like isoform X1.	0.453
ENSSSAP00000012988	LOC106581333	ENSSSAP00000012988	ENSSSAP00000026397	annotation not available	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.541
ENSSSAP00000012988	LOC106601978	ENSSSAP00000012988	ENSSSAP00000001551	annotation not available	Sodium-dependent neutral amino acid transporter B(0)AT2-like.	0.530
ENSSSAP00000012988	LOC106603642	ENSSSAP00000012988	ENSSSAP00000024589	annotation not available	Cell adhesion molecule 1-like isoform X1.	0.456
ENSSSAP00000012988	gnl3l	ENSSSAP00000012988	ENSSSAP00000023234	annotation not available	Guanine nucleotide-binding protein-like 3-like protein.	0.552
ENSSSAP00000023171	ENSSSAP00000012988	ENSSSAP00000023171	ENSSSAP00000012988	annotation not available	annotation not available	0.481
ENSSSAP00000053156	ENSSSAP00000012988	ENSSSAP00000053156	ENSSSAP00000012988	Solute carrier family 6 member 7.	annotation not available	0.530
LOC106562421	ENSSSAP00000012988	ENSSSAP00000050061	ENSSSAP00000012988	Sodium-dependent noradrenaline transporter-like.	annotation not available	0.615
LOC106566567	ENSSSAP00000012988	ENSSSAP00000107915	ENSSSAP00000012988	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	annotation not available	0.538
LOC106566567	gnl3l	ENSSSAP00000107915	ENSSSAP00000023234	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	Guanine nucleotide-binding protein-like 3-like protein.	0.591
LOC106567730	ENSSSAP00000012988	ENSSSAP00000070614	ENSSSAP00000012988	Cell adhesion molecule 1-like isoform X3.	annotation not available	0.456
LOC106567730	LOC106581151	ENSSSAP00000070614	ENSSSAP00000079245	Cell adhesion molecule 1-like isoform X3.	Cell adhesion molecule 1-like isoform X1.	0.853
LOC106581151	ENSSSAP00000012988	ENSSSAP00000079245	ENSSSAP00000012988	Cell adhesion molecule 1-like isoform X1.	annotation not available	0.453
LOC106581151	LOC106567730	ENSSSAP00000079245	ENSSSAP00000070614	Cell adhesion molecule 1-like isoform X1.	Cell adhesion molecule 1-like isoform X3.	0.853
LOC106581151	LOC106603642	ENSSSAP00000079245	ENSSSAP00000024589	Cell adhesion molecule 1-like isoform X1.	Cell adhesion molecule 1-like isoform X1.	0.853