STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000012995annotation not available (95 aa)    
Predicted Functional Partners:
LOC106608883
Growth-regulated alpha protein-like.
    
 0.721
LOC106589772
Stromal cell-derived factor 1-like; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.697
SDF1
Stromal cell-derived factor 1 precursor; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.697
LOC106604225
Stromal cell-derived factor 1-like; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.697
cxcl12
C-X-C motif chemokine ligand 12.
   
 0.697
tsg6
Tumor necrosis factor-inducible protein TSG-6 precursor.
   
 
 0.640
LOC106582339
Tumor necrosis factor-inducible gene 6 protein-like isoform X1.
   
 
 0.640
cxl14
C-X-C motif chemokine 14 precursor.
    
 
 0.563
LOC106604935
C-X-C motif chemokine 14-like isoform X1.
    
 
 0.563
LOC106580715
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
  
0.539
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.