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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
idh3aIsocitrate dehydrogenase [NAD] subunit, mitochondrial. (383 aa)    
Predicted Functional Partners:
LOC106572708
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.999
LOC106573004
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.999
LOC106565197
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.999
LOC106567023
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.999
ACO2
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.994
LOC106589533
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.994
ENSSSAP00000058436
Isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta.
  
0.991
OGDH
2-oxoglutarate dehydrogenase, mitochondrial isoform X1.
  
 0.987
LOC106580202
2-oxoglutarate dehydrogenase, mitochondrial-like isoform X1.
  
 0.987
LOC106586335
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.976
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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