Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000013005annotation not available (608 aa)    
Predicted Functional Partners:
LOC106569521
semaphorin-4E-like; Belongs to the semaphorin family.
    
 0.813
LOC106613204
semaphorin-4E-like; Belongs to the semaphorin family.
    
 0.785
sema4d
semaphorin-4D isoform X1; Belongs to the semaphorin family.
    
 0.785
LOC106613811
semaphorin-4E-like; Belongs to the semaphorin family.
    
 0.785
LOC106584397
semaphorin-4E-like; Belongs to the semaphorin family.
    
 0.785
LOC106590027
Neuropilin; Belongs to the neuropilin family.
   
 0.749
LOC106578544
Neuropilin; Belongs to the neuropilin family.
   
 0.749
LOC106600994
Rho-related GTP-binding protein RhoN-like.
    
 0.737
LOC106607263
Rho-related GTP-binding protein RhoN-like.
    
 0.737
LOC106579157
Rho-related GTP-binding protein RhoN-like.
    
 0.737
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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