Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem135Transmembrane protein 135. (456 aa)    
Predicted Functional Partners:
pxmp4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.806
st6galnac4
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 precursor; Belongs to the glycosyltransferase 29 family.
      
 0.590
LOC106569362
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3-like; Belongs to the glycosyltransferase 29 family.
      
 0.590
LOC106572260
Transmembrane protein 115-like.
      
 0.579
tmem115
Transmembrane protein 115.
      
 0.579
LOC106591093
G patch domain-containing protein 1-like.
      
 0.558
ttc36
Tetratricopeptide repeat protein 36.
      
 0.540
LOC106571008
Protein FAM167A-like.
      
 0.487
ccdc25
Coiled-coil domain-containing protein 25.
      
 0.480
ENSSSAP00000088060
annotation not available
      
 0.480
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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