STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601255Cytochrome b561-like. (255 aa)    
Predicted Functional Partners:
pam
Peptidyl-glycine alpha-amidating monooxygenase isoform X1.
      
 0.596
LOC106609418
Putative ferric-chelate reductase 1.
      
 0.508
LOC106576314
Putative ferric-chelate reductase 1 isoform X3.
      
 0.508
LOC106578511
Putative ferric-chelate reductase 1 isoform X1.
      
 0.508
LOC106562298
Chromodomain Y-like protein 2.
    
   0.474
LOC106597143
Chromodomain Y-like protein.
    
   0.474
LOC106568662
Chromodomain Y-like protein isoform X1.
    
   0.474
cdyl2
Chromodomain Y-like protein 2.
    
   0.474
ENSSSAP00000104387
annotation not available
      
 0.432
SLC31A1
Solute carrier family 31 (copper transporter), member 1.
      
 0.412
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.