close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000013115Si:dkey-19e4.5. (231 aa)    
Predicted Functional Partners:
usp30
Ubiquitin carboxyl-terminal hydrolase.
    
  0.662
tomm70a
Mitochondrial import receptor subunit TOM70.
     
 0.550
suox
Sulfite oxidase, mitochondrial isoform X2.
      
 0.511
tomm20
Mitochondrial import receptor subunit TOM20 homolog.
   
 
 0.484
LOC106564829
Mitochondrial import receptor subunit TOM20 homolog.
   
 
 0.484
LOC106586159
Mitochondrial import receptor subunit TOM20 homolog.
   
 
 0.484
COX2
Cytochrome c oxidase subunit 2; Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol- cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and t [...]
    
 
 0.483
ptrh1
Probable peptidyl-tRNA hydrolase.
      
 0.448
LOC106580025
Probable peptidyl-tRNA hydrolase isoform X2.
      
 0.448
ENSSSAP00000041660
Cytochrome c oxidase assembly factor COX18.
      
 0.447
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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