Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSSSAP00000013115Si:dkey-19e4.5. (231 aa)    
Predicted Functional Partners:
LOC106586742
Cytochrome c oxidase assembly factor 5.
   
 
 0.846
LOC106604458
Cytochrome c oxidase assembly protein COX15 homolog.
     
 0.820
LOC106612160
Cytochrome C oxidase assembly protein COX11, mitochondrial.
     
 0.719
COA3
Cytochrome c oxidase assembly factor 3.
   
 0.719
LOC106589644
Cytochrome c oxidase assembly factor 3 homolog, mitochondrial.
   
 0.719
LOC106589330
Cytochrome C oxidase assembly protein COX19.
   
 
 0.719
surf1
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
   
 0.662
usp30
Ubiquitin carboxyl-terminal hydrolase.
    
  0.651
COX2
Cytochrome c oxidase subunit 2; Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol- cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and t [...]
    
 0.650
ccd56
Coiled-coil domain-containing protein 56.
   
 0.647
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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