STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankub1Protein ANKUB1. (522 aa)    
Predicted Functional Partners:
commd2
COMM domain-containing protein 2.
      
 0.590
lrrc71
Leucine-rich repeat-containing protein 71 isoform X1.
      
 0.524
tctex1d1
Tctex1 domain-containing protein 1.
      
 0.511
LOC106586307
Mitogen-activated protein kinase kinase kinase 19-like isoform X1.
   
  
 0.494
parvg
Gamma-parvin.
      
 0.457
ENSSSAP00000060553
Leucine-rich repeat-containing protein 73-like.
      
 0.408
lrrc73
Leucine-rich repeat-containing protein 73.
      
 0.408
daw1
Dynein assembly factor with WDR repeat domains 1.
      
 0.403
ENSSSAP00000104527
annotation not available
      
 0.403
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.