STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106565254SET domain-containing protein 5-like isoform X1. (1606 aa)    
Predicted Functional Partners:
ENSSSAP00000042990
annotation not available
    
 0.767
thumpd3
THUMP domain-containing protein 3.
      
 0.601
nudt13
Nucleoside diphosphate-linked moiety X motif 13.
      
 0.593
LOC106570165
Coiled-coil domain-containing protein 106-like.
      
 0.593
LOC100380641
E3 ubiquitin-protein ligase HUWE1 isoform X13.
   
 
 0.592
LOC106567026
E3 ubiquitin-protein ligase HUWE1-like isoform X16.
   
 
 0.592
gtf3c1
General transcription factor 3C polypeptide 1.
   
 
 0.540
LOC106608924
Histone acetyltransferase p300-like isoform X2.
   
 0.508
xpp3
Histone acetyltransferase p300-like isoform X8.
   
 0.508
LOC106589530
CREB-binding protein-like isoform X4.
   
 0.508
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (28%) [HD]