STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106565251Lipoma HMGIC fusion partner-like 3 protein isoform X1. (250 aa)    
Predicted Functional Partners:
LOC106569331
Transmembrane inner ear expressed protein-like.
     
 0.640
LOC106587968
Cadherin-related family member 5-like.
   
 0.602
ENSSSAP00000031207
Protocadherin-related 15b.
   
 0.602
LOC106584514
Cadherin-related family member 5-like isoform X1.
   
 0.602
LOC106589399
Protocadherin-15-like isoform X4.
   
 0.602
LOC106607182
Protocadherin-15-like.
   
 0.602
LOC106578947
Protocadherin-15-like isoform X1.
   
 0.602
ENSSSAP00000112008
Protocadherin-related 15a.
   
 0.602
LOC106599657
Uncharacterized protein LOC106599657.
     
 0.598
tmc3
Transmembrane channel-like protein.
   
 
 0.551
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.